研究成果(論文)

プレスリリース/プロトコル 総説/書籍 コンテンツ・データ
  1. Maestre-Reyna, M., Wang, P.-H., Nango, E., Hosokawa, Y., Saft, M., Furrer, A., Yang, C.-H., Gusti Ngurah Putu, E.P., Wu, W.J., Emmerich, H.-J., Caramello, N., Franz-Badur, S., Yang, C., Engilberge, S., Wranik, M., Glover, H.L., Weinert, T., Wu, H.-Y., Lee, C.-C., Huang, W.-C., Huang, K.-F., Chang, Y.-K., Liao, J.-H., Weng, J.-H., Gad, W., Chang, C.-W., Pang, A.H., Yang, K.-C., Lin, W.-T., Chang, Y.-C., Gashi, D., Beale, E., Ozerov, D., Nass, K., Knopp, G., Johnson, P.J.M., Cirelli, C., Milne, C., Bacellar, C., Sugahara, M., Owada, S., Joti, Y., Yamashita, A., Tanaka, R., Tanaka, T., Luo, F., Tono, K., Zarzycka, W., Müller, P., Alahmad, M.A., Bezold, F., Fuchs, V., Gnau, P., Kiontke, S., Korf, L., Reithofer, V., Rosner, C.J., Seiler, E.M., Watad, M., Werel, L., Spadaccini, R., Yamamoto, J., Iwata, S., Zhong, D., Standfuss, J., Royant, A., Bessho, Y., Essen, L.-O. & Tsai, M.D.
    Visualizing the DNA repair process by a photolyase at atomic resolution, Science 382, 6674 (2023).
  2. Hutchison, C.D.M., Baxter, J.M., Fitzpatrick, A., Dorlhiac, G., Fadini, A., Perrett, S., Maghlaoui, K., Lefèvre, S.B., Cordon-Preciado, V., Ferreira, J.L., Chukhutsina, V.U., Garratt, D., Barnard, J., Galinis, G., Glencross, F., Morgan, R.M., Stockton, S., Taylor, B., Yuan, L., Romei, M.G., Lin, C.-Y., Marangos, J.-P., Schmidt, M., Chatrchyan, V., Buckup, T., Morozov, D., Park, J., Park, S., Eom, I., Kim, M., Jang, D., Choi, H., Hyun, H.J., Park, G., Nango, E., Tanaka, R., Owada, S., Tono, K., DePonte, D.P., Carbajo, S., Seaberg, M., Aquila, A., Boutet, S., Barty, A., Iwata, S., Boxer, S.G., Groenhof, G. & van Thor, J.J.
    Optical control of ultrafast structural dynamics in a fluorescent protein, Nat. Chem. 15, 1607-1615 (2023).
  3. Wolff, A.M., Nango, E., Young, I.D., Brewster, A.S., Kubo, M., Nomura, T., Sugahara, M., Owada, S., Barad, B.A., Ito, K., Bhowmick, A., Carbajo, S., Hino, T., Holton, J.M., Im, D., O’Riordan, L. J., Tanaka, T., Tanaka, R., Sierra, R.G., Yumoto, F., Tono, K., Iwata, S., Sauter, N.K., Fraser, J.S. & Thompson, M.C.
    Mapping protein dynamics at high spatial resolution with temperature-jump X-ray crystallography, Nat. Chem. 15, 1549-1558 (2023).
  4. Gruhl, T., Weinert, T., Rodrigues, M.J., Milne, C.J., Ortolani, G., Nass, K., Nango, E., Sen, S., Johnson, P.J.M., Cirelli, C., Furrer, A., Mous, S., Skopintsev, P., James, D., Dworkowski, F., Båth, P., Kekilli, D., Ozerov, D., Tanaka, R., Glover, H., Bacellar, C., Brünle, S., Casadei, C.M., Diethelm, A.D., Gashi, D., Gotthard, G., Guixà-González, R., Joti, Y., Kabanova, V., Knopp, G., Lesca, E., Ma, P., Martiel, I., Mühle, J., Owada, S., Pamula, F., Sarabi, D., Tejero, O., Tsai, C.-J., Varma, N., Wach, A., Boutet, S., Tono, K., Nogly, P., Deupi, X., Iwata, S., Neutze, R., Standfuss, J., Schertler, G. & Panneels, V.
    Ultrafast structural changes direct the first molecular events of vision. Nature 615, 939-944 (2023).
  5. Liu, X., Liu, P., Li, H., Xu, Z., Jia, L., Xia, Y., Yu, M., Tang, W., Zhu, W., Chen, C., Zhang, Y., Nango, E., Tanaka, R., Luo, F., Kato, K., Nakajima, Y., Kishi, S., Yu, H., Matsubara, N., Owada, S., Tono, K., Iwata, S., Yu, L.-J., Shen, J.-R. & Wang, J.
    Excited-state intermediates in a designer protein encoding a phototrigger caught by an X-ray free-electron laser. Nat. Chem. 14, 1054-1060 (2022).
  6. Maestre-Reyna, M., Yang, C.H., Nango, E., Huang, W.C., Putu, E.P.G.N., Wu, W.J., Wang, P.H., Franz-Badur, S., Saft, M., Emmerich, H.J., Wu, H.Y., Lee, C.C., Huang, K.F., Chang, Y.K., Liao, J.H., Weng J.H., Gad, W., Chang, C.W., Pang, A.H., Sugahara, M., Owada, S., Hosokawa, Y., Joti, Y., Yamashita, A., Tanaka, R., Tanaka, T., Luo, F., Tono, K., Hsu, K.C., Kiontke, S., Schapiro, I.,   Spadaccini, R., Royant, A., Yamamoto, J., Iwata, S., Essen, L.O., Bessho, Y., Tsai, M.D.
    Serial crystallography captures dynamic control of sequential electron and proton transfer events in a flavoenzyme. Nat. Chem. 14, 677-685 (2022).
  7. Hosaka, T., Nomura, T., Kubo, M., Nakane, T., Fangjia, L., Sekine, S.-i., Ito, T., Murayama, K., Ihara, K., Ehara, H., Kashiwagi, K., Katsura, K., Akasaka, R., Hisano, T., Tanaka, T., Tanaka, R., Arima, T., Yamashita, A., Sugahara, M., Naitow, H., Matsuura, Y., Yoshizawa, S., Tono, K., Owada, S., Nureki, O., Kimura-Someya, T., Iwata, S., Nango, E., Shirouzu, M.
    Conformational alterations in unidirectional ion transport of a light-driven chloride pump revealed using X-ray free electron lasers. PNAS 119, e2117433119 (2022).
  8. Pan, D., Oyama, R., Sato, T., Nakane, T., Mizunuma, R., Matsuoka, K., Joti, Y., Tono, K., Nango, E., Iwata, S., Nakatsu, T., Kato, H.
    Crystal structure of CmABCB1 multi-drug exporter in lipidic mesophase revealed by LCP-SFX. IUCrJ 9, 134-145 (2021)
  9. Murakawa, T., Suzuki, M., Arima, T., Sugahara, M., Tanaka, T., Tanaka, R., Iwata, S., Nango, E., Tono, K., Hayashi, H., Fukui, K., Yano, T., Tanizawa, K., Okajima, T.
    Microcrystal preparation for serial femtosecond X-ray crystallography of bacterial copper amine oxidase. Acta Crystallogr F Struct Biol Commun. 77, 356-363 (2021)
  10. Cellini, A., Yuan Wahlgren, W., Henry, L., Pandey, S., Ghosh, S., Castillon, L., Claesson, E., Takala, H., Kübel, J., Nimmrich, A., Kuznetsova, V., Nango, E., Iwata, S., Owada, S., Stojković, E.A., Schmidt, M., Ihalainen, J.A., Westenhoff, S.
    The three-dimensional structure of Drosophila melanogaster (6-4) photolyase at room temperature. Acta Crystallogr D Struct Biol. 77, 1001-1009 (2021)
  11. Maeda, S., Shiimura, Y., Asada, H., Hirata, K., Luo, F., Nango, E., Tanaka, N., Toyomoto, M., Inoue, A., Aoki, J., Iwata, S., Hagiwara, M.
    Endogenous agonist-bound S1PR3 structure reveals determinants of G protein-subtype bias. Sci Adv. 7, eabf5325 (2021)
  12. Carrillo, M., Pandey, S., Sanchez1, J., Noda1, M., Poudyal, I., Aldama, L., Malla, T. N., Claesson, E., Wahlgren, W. Y., Feliz, D., Šrajer, V., Maj, M., Castillon, L., Iwata, S., Nango, E., Tanaka, R., Tanaka, T., Luo, F., Tono, K., Owada, S., Westenhoff, S., Stojković, E. A., Schmidt, M.
           High-resolution Crystal Structures of Transient Intermediates in the Phytochrome
    Photocycle. Structure 29, 743-754 (2021).
  13. Oda, K., Nomura, T., Nakane, T., Yamashita, K., Inoue, K., Ito, S., Vierock, J., Hirata, K., Maturana, A. D., Katayama, K., Ikuta, T., Ishigami, I., Izume, T., Umeda, R., Eguma, R., Oishi, S., Kasuya, G., Kato, T., Kusakizako, T., Shihoya, W., Shimada, H., Takatsuji, T., Takemoto, M., Taniguchi, R., Tomita, A., Nakamura, R., Fukuda, M., Miyauchi, H., Lee, Y., Nango, E., Tanaka, R., Tanaka, T., Sugahara, M., Kimura, T., Shimamura, T., Fujiwara, T., Yamanaka, Y., Owada, S., Joti, Y., Tono, K., Ishitani, R., Hayashi, S., Kandori, H., Hegemann, P., Iwata, S., Kubo, M., Nishizawa, T. & Nureki, O.
    Time-Resolved Serial Femtosecond Crystallography Reveals Early Structural Changes in Channelrhodopsin. ELife 10, 62389 (2021).
  14. Claesson, E., Wahlgren, W. Y., Takala, H., Pandey, S., Castillon, L., Kuznetsova, V., Henry, L., Panman, M., Carrillo, M., Kubel, J., Nanekar, R., Isaksson, L., Nimmrich, A., Cellini, A., Morozov, D., Maj, M., Kurttila, M., Bosman, R., Nango, E., Tanaka, R., Tanaka, T., Fangjia, L., Iwata, S., Owada, S., Moffat, K., Groenhof, G., Stojkovic, E. A., Ihalainen, J. A., Schmidt, M. & Westenhoff, S.
    The primary structural photoresponse of phytochrome proteins captured by a femtosecond X-ray laser Elife 9, 53514 (2020).
  15. Ihara, K., Hato, M., Nakane, T., Yamashita, K., Kimura-Someya, T., Hosaka, T., Ishizuka-Katsura, Y., Tanaka, R., Tanaka, T., Sugahara, M., Hirata, K., Yamamoto, M., Nureki, O., Tono, K., Nango, E., Iwata, S. & Shirouzu, M.
    Isoprenoid-chained lipid EROCOC17+4: a new matrix for membrane protein crystallization and a crystal delivery medium in serial femtosecond crystallography.
    Sci Rep 10, 19305 (2020).
  16. Im, D., Inoue, A., Fujiwara, T., Nakane, T., Yamanaka, Y., Uemura, T., Mori, C., Shiimura, Y., Kimura, K. T., Asada, H., Nomura, N., Tanaka, T., Yamashita, A., Nango, E., Tono, K., Kadji, F. M. N., Aoki, J., Iwata, S. & Shimamura, T.
    Structure of the dopamine D2 receptor in complex with the antipsychotic drug spiperone Nat. Commun. 11, 6442 (2020).
  17. Wickstrand, C., Katona, G., Nakane, T., Nogly, P., Standfuss, J., Nango, E., Neutze, R.
    A tool for visualizing protein motions in time-resolved crystallography. Struct Dyn 7, 024701 (2020).
  18. Wolff, A., Young, I.D., Sierra, R.G., Brewster, A.S., Martynowycz, M.W., Nango, E.,  Sugahara, M., Nakane, T., Ito, K., Aquila, A., Bhowmik, A., Biel, J., Carbajo, S., Cohen, A.E.,  Cortez, S., Gonzalez, A., Hino, T., Im, D., Koralek, J.D., Kubo, M., Lazarou, T.S., Nomura, T., Owada, S., Samelson, A.J., Tanaka, T., Tanaka, R., Thompson, E.M., Bedem, H., Woldeyes, R.A., Yumoto, F., Zhao, W., Tono, K., Boutet, S., Iwata, S., Gonen, T., Sauter, N.K., Fraser, J.S., Thompson, M.
    Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals.
    IUCrJ 7, 306-323 (2020)
  19. Nango, E*., Kubo, M. *, Tono, K., Iwata, S.
    Pump-Probe Time-Resolved Serial Femtosecond Crystallography at SACLA: Current Status and Data Collection Strategies. Appl. Sci. 9(24), 5505 (2019)
  20. Shimazua, Y., Tono, K., Tanaka, T., Yamanaka, Y., Nakane, T., Mori, C., Kimura, T. K., Fujiwara, T., Sugahara, M., Tanaka, R., Doak, R. B., Shimamura, T., Iwata, S., Nango, E. and Yabashi, M.
    High-viscosity sample injection device for serial femtosecond crystallography at atmospheric pressure. J. Appl. Cryst. 52, 1280–1288 (2019)
  21. Ishchenko, A., Stauch, B., Han, W. G, Batyuk, A., Shiriaeva, A., Li, C., Zatsepin, N., Weierstall, U., Liu, W., Nango, E., Nakane, T., Tanaka, R., Tono, K., Joti, Y., Iwata, S., Moraes, I., Gati, C. and Cherezov, V.
    Toward GPCR Structure-Based Drug Design Using X-ray Lasers. IUCrJ 6, 1106-1119 (2019)
  22. Sanchez, J. C., Carrillo, M., Pandey, S., Noda, M., Aldama, L., Feliz, D., Claesson, E., Whalgren, W. Y., Tracy, G., Duong, P., Nugent, A. C., Field, A., Srajer, V., Kupitz, C., Iwata, S., Nango, E., Tanaka, R., Tanaka, T., Fangjia, L., Tono, K., Owada, S., Westenhoff, S., Schmidt, M. and Stojkovic, E.A.
    High-resolution crystal structures of amyxobacterial phytochrome at cryo and room temperatures. Struct. Dyn. 6(5) 054701. (2019)
  23. James, D., Weinert, T., Skopintsev, P., Furrer, A., Gashi, D., Tanaka, T., Nango, E., Nogly, P., and Standfuss, J
    Improving high viscosity extrusion of microcrystals for time-resolved serial femtosecond crystallography at X-ray lasers. J. Vis. Exp. 144, e59087 (2019)
  24. Wickstrand, C., Nogly, P., Nango, E., Iwata, S., Standfuss, J., and Neutze, R. Bacteriorhodopsin: Structural Insights Revealed Using X-Ray Lasers and Synchrotron Radiation. Annu Rev Biochem. 88 59-83 (2019)
  25. Woitowitch, N.C., Halvati, A.S., Waltz, P., Kupitz, C., Valera, J., Tracy, G., Gallagher, K.D., Claesson, E., Nakane, T., Pandey, S., Nelson, G., Tanaka, R., Nango, E., Mizohata, E., Owada, S., Tono, K., Joti, Y., Nugent, A.C., Patel, H., Mapara, A., Hopkins, J., Duong, P., Bizhga, D., Kovaleva, S.E., Peter, R.S., Hernandez, C., Ozarowski, W.B., Roy-Chowdhuri, S., Yang, J.-H., Edlund, P., Takala, H., Ihalainen, J., Scales, J., Norwood, T., Poudyal, I., Fromme, P.,  Spence, J., Moffat, K., Westenhoff, S., Schmidt, M. and Stojkovic, E.M.
    Structural Basis for Light Control of Cell Development as Revealed by Crystal Structures of a Myxobacterial Phytochrome. IUCrJ 5, 619-634 (2018)
  26. Nogly, P., Weinert, T., James, D., Carbajo, S., Ozerov, D., Furrer, A., Gashi, D., Borin, V., Skopintsev, P., Jaeger, K., Nass, K., Båth, P., Bosman, R., Koglin, J., Seaberg, M., Lane, T., Kekilli, D., Brünle, S., Tanaka, T., Wu, W., Milne, C., White, T., Barty, A., Weierstall, U., Panneels, V., Nango, E., Iwata, S., Hunter, M., Schapiro, I., Schertler, G., Neutze, R., and Standfuss, J.
    Retinal isomerization in bacteriorhodopsin captured by a femtosecond x-ray laser. Science 261, 145-152 (2018)
  27. Suno, R., Kimura, K.T., Nakane, T., Yamashita, K., Wang, J., Fujiwara, T., Yamanaka, Y., Im, D., Horita, S., Tsujimoto, H., Tawaramoto, M.S., Hirokawa, T., Nango, E., Tono, K., Kameshima, T., Hatsui, T., Joti, Y., Yabashi, M., Shimamoto, K., Yamamoto, M., Rosenbaum, D.M., Iwata, S., Shimamura, T., Kobayashi, T.
    Crystal Structures of Human Orexin 2 Receptor Bound to the Subtype-Selective Antagonist EMPA. Structure 26, 7-19 (2018)
  28. Mizohata, E., Nakane, T., Fukuda, Y., Nango, E., Iwata, S.
    Serial femtosecond crystallography at the SACLA: breakthrough to dynamic structural biology”Biophys Rev. 10.1007/s12551-017-0344-9. (2017)
  29. Gorel, A., Motomura, K., Fukuzawa, H., Doak, R.B., Grünbein, M.L., Hilpert, M., Inoue, I., Kloos, M., Nass Kovács, G., Nango, E., Nass, K., Roome, C.M., Shoeman, R.L., Tanaka, R., Tono, K., Foucar, L., Joti, Y., Yabashi, M., Iwata, S., Ueda, K., Barends, T.R.M. and Schlichting, I.
    Two-colour serial femtosecond crystallography dataset from gadoteridol-derivatized lysozyme for MAD phasing. Sci. Data. 4, 170188 (2017)
  30. Tosha, T., Nomura, T., Nishida, T., Saeki, N., Okubayashi, K., Yamagiwa, R., Sugahara, M., Nakane, T., Yamashita, K., Hirata, K., Ueno, G., Kimura, T., Hisano, T., Muramoto, K., Sawai, H., Takeda, H., Mizohata, E., Yamashita, A., Kanematsu, Y., Takano, Y., Nango, E., Tanaka, R., Nureki, O., Shoji, O., Ikemoto, Y., Murakami, H., Owada, S., Tono, K., Yabashi, M., Yamamoto, M., Ago, H., Iwata, S., Sugimoto, H., Shiro, Y. and Kubo M.
    Capturing an Initial Intermediate during the P450nor Enzymatic Reaction using Time-Resolved XFEL Crystallography and Caged-Substrate. Nat Commun. 8, 1585 (2017)
  31. Gorel, A., Motomura, K., Fukuzawa, H., Doak, R., Grünbein, M. L., Hilpert, M., Inoue, I., Kloos, M., Kovacsova, G., Nango, E., Nass, K., Roome, C., Shoeman, R., Tanaka, R., Tono, K., Joti, Y., Iwata, S., Yabashi, M., Foucar, L., Ueda, K., Thomas, R. M., Barends, R. M. T. and Schlichting, I.
    Multi-wavelength anomalous diffraction de-novo phasing using a two-colour X-ray free-electron laser with wide tunability. Nat. Commun. 8, 1170 (2017)  
  32. Yamashita, K., Kuwabara, N., Nakane, T., Murai, T., Mizohata, E., Sugahara, M., Pan, D., Masuda, T., Suzuki, M., Sato, T., Kodan, A., Yamaguchi, T., Nango, E., Tanaka, T., Tono, K., Joti, Y., Kameshima, T., Hatsui, T., Yabashi, M., Manya, H., Endo, T., Kato, R., Senda, T., Kato, H., Iwata, S., Ago, H., Yamamoto, M., Yumoto, F. and Nakatsu, T.
    Experimental phase determination with selenomethionine or mercury-derivatization in serial femtosecond crystallography. IUCrJ. 4, 639-647 (2017)
  33. Kubo, M., Nango, E., Tono, K., Kimura, T., Owada, S., Song, C., Mafuné, F., Miyajima, K., Takeda, Y., Kohno, J. Y., Miyauchi, N., Nakane, T., Tanaka, T., Nomura, T., Davidsson, J., Tanaka, R., Murata, M., Kameshima, T., Hatsui, T., Joti, Y., Neutze, R., Yabashi, M. and Iwata, S.
    Nanosecond pump-probe device for time-resolved serial femtosecond crystallography
    developed at SACLA. J. Synchrotron Radiat. 24, 1086-1091 (2017)
  34. Thomaston, J. L., Woldeyes, R. A., Nakane, T., Yamashita, A., Tanaka, T., Koiwai, K., Brewster, A. S., Barad, B. A., Chen, Y., Lemmin, T., Uervirojnangkoorn, M., Arima, T., Kobayashi, J., Masuda, T., Suzuki, M., Sugahara, M., Sauter, N. K., Tanaka, R., Nureki, O., Tono, K., Joti, Y., Nango, E., Iwata, S., Yumoto, F., Fraser, J. S. and DeGrado, W. F.
    XFEL structures of the influenza M2 proton channel: Room temperature water networks and insights into proton conduction. Proc. Natl. Acad. Sci. 10.1073/pnas.1705624114 (2017)
  35. Naitow, H., Matsuura, Y., Tono, K., Joti, Y., Kameshima, T., Hatsui, T., Yabashi, M., Tanaka, R., Tanaka, T., Sugahara, M., Kobayashi, J., Nango, E., Iwata, S. and Kunishima, N.
    Protein-ligand complex structure from serial femtosecond crystallography using
    soaked thermolysin microcrystals and comparison with structures from synchrotron
    radiation. Acta Crystallogr. D Struct. Biol. 73, 702-709 (2017)
  36. Andersson, R., Safari, C., Dods, R., Nango, E., Tanaka, R., Yamashita, A., Nakane, T., Tono, K., Joti, Y., Båth, P., Dunevall, E., Bosman, R., Nureki, O., Iwata, S., Neutze, N. and Branden, G.
    Serial femtosecond crystallography structure of cytochrome c oxidase at room
    temperature. Sci. Rep. 7, 4518 (2017)
  37. Sugahara, M., Nakane, T., Masuda, T., Suzuki, M., Inoue, S., Song, C., Tanaka, R., Nakatsu, T., Mizohata, E., Yumoto, F., Tono, K., Joti Y., Kameshima, T., Hatsui, T., Yabashi, M., Nureki, O., Numata, K., Nango, E. and Iwata, S. Hydroxyethyl cellulose matrix applied to serial crystallography. Sci. Rep. 7, 703 (2017)
  38. Masuda, T., Suzuki, M., Inoue, S. Song, C., Nakane, T., Nango, E., Tanaka, R., Tono, K., Joti, Y., Kameshima, T., Hatsui, T., Yabashi, M., Mikami, B., Nureki, O., Numata, K., Iwata, S. and Sugahara, M.
    Atomic resolution structure of serine protease proteinase K at ambient temperature. Sci. Rep. 7, 45604 (2017)
  39. Suga, M., Akita, F., Sugahara, M., Kubo, M., Nakajima, Y., Nakane, T., Yamashita, K., Umena, Y., Nakabayashi, M., Yamane, T., Nakano, T., Suzuki, M., Masuda, T., Inoue, S., Kimura, T., Nomura, T., Yonekura, S., Yu, L. J., Sakamoto, T., Motomura, T., Chen, J. H., Kato, Y., Noguchi, T., Tono, K., Joti, Y., Kameshima, T., Hatsui, T., Nango, E., Tanaka, R., Naitow, H., Matsuura, Y., Yamashita, A., Yamamoto, M., Nureki, O., Yabashi, M., Ishikawa, T., Iwata, S. and Shen, J. R.
    Light-induced structural changes and the site of O=O bond formation in PSII caught by XFEL. Nature 543, 131–135 (2017)
  40. Nango, E., Royant, A., Kubo, M., Nakane, T., Wickstrand, C., Kimura, T., Tanaka, T., Tono, K., Song, C., Tanaka, R., Arima, T., Yamashita, A., Kobayashi, J., Hosaka, T., Mizohata, E., Nogly, P., Sugahara, M., Nam, D., Nomura, T., Shimamura, T., Im, D., Fujiwara, T., Yamanaka, Y., Jeon, B., Nishizawa, T., Oda, K., Fukuda, M., Andersson, R., Bath, P., Dods, R., Davidsson, J., Matsuoka, S., Kawatake, S., Murata, M., Nureki, O., Owada, S., Kameshima, T., Hatsui, T., Joti, Y., Schertler, G., Yabashi, M., Bondar, A. N., Standfuss, J., Neutze, R. and Iwata, S.
    A three-dimensional movie of structural changes in bacteriorhodopsin. Science 354, 1552-1557 (2016)
  41. Nogly, P., Panneels, V., Nelson, G., Gati, C., Kimura, T., Milne, C., Milathianaki, D., Kubo, M., Wu, W., Conrad, C., Coe, J., Bean, R., Zhao, Y., Bath, P., Dods, R., Harimoorthy, R., Beyerlein, K. R., Rheinberger, J., James, D., DePonte, D., Li, C., Sala, L., Williams, G. J., Hunter, M. S., Koglin, J. E., Berntsen, P., Nango, E., Iwata, S., Chapman, H. N., Fromme, P., Frank, M., Abela, R., Boutet, S., Barty, A., White, T. A., Weierstall, U., Spence, J., Neutze, R., Schertler, G. and Standfuss, J.
    Lipidic cubic phase injector is a viable crystal delivery system for time-resolved serial crystallography. Nat. Commun. 7, 12314 (2016)
  42. Sugahara, M., Song, C., Suzuki, M., Masuda, T., Inoue, S., Nakane, T., Yumoto, F., Nango, E., Tanaka, R., Tono, K., Joti, Y., Kameshima, T., Hatsui, T., Yabashi, M., Nureki, O., Numata, K. and Iwata, S.
    Oil-free hyaluronic acid matrix for serial femtosecond crystallography. Sci. Rep. 6, 24484 (2016)
  43. Nakane, T., Joti, Y., Tono, K., Yabashi, M., Nango, E., Iwata, S., Ishitani, R. and Nureki, O. Data processing pipeline for serial femtosecond crystallography at SACLA. J. Appl. Crystallogr. 49, 1035-1041 (2016)
  44. Nakane, T., Hanashima, S., Suzuki, M., Saiki, H., Hayashi, T., Kakinouchi, K., Sugiyama, S., Kawatake, S., Matsuoka, S., Matsumori, N., Nango, E., Kobayashi, J., Shimamura, T., Kimura, K., Mori, C., Kunishima, N., Sugahara, M., Takakyu, Y., Inoue, S., Masuda, T., Hosaka, T., Tono, K., Joti, Y., Kameshima, T., Hatsui, T., Yabashi, M., Inoue, T., Nureki, O., Iwata, S., Murata, M. and Mizohata, E.
    Membrane protein structure determination by SAD, SIR, or SIRAS phasing in serial femtosecond crystallography using an iododetergent. Proc. Natl. Acad. Sci. 113, 13039-13044 (2016)
  45. Mafune, F., Miyajima, K., Tono, K., Takeda, Y., Kohno, J. Y., Miyauchi, N., Kobayashi, J., Joti, Y., Nango, E., Iwata, S. and Yabashi, M.
    Microcrystal delivery by pulsed liquid droplet for serial femtosecond crystallography. Acta Crystallogr. D Struct. Biol. 72, 520-523 (2016)
  46. Fukuda, Y., Tse, K. M., Suzuki, M., Diederichs, K., Hirata, K., Nakane, T., Sugahara, M., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Matsumura, H., Inoue, T., Iwata, S. and Mizohata, E.
    Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography. J. Biochem. 159, 527-538 (2016)
  47. Fukuda, Y., Tse, K. M., Nakane, T., Nakatsu, T., Suzuki, M., Sugahara, M., Inoue, S., Masuda, T., Yumoto, F., Matsugaki, N., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Murphy, M. E., Inoue, T., Iwata, S. and Mizohata, E.
    Redox-coupled proton transfer mechanism in nitrite reductase revealed by femtosecond crystallography. Proc. Natl. Acad. Sci. 113, 2928-2933 (2016)
  48. Edlund, P., Takala, H., Claesson, E., Henry, L., Dods, R., Lehtivuori, H., Panman, M., Pande, K., White, T., Nakane, T., Berntsson, O., Gustavsson, E., Bath, P., Modi, V., Roy-Chowdhury, S., Zook, J., Berntsen, P., Pandey, S., Poudyal, I., Tenboer, J., Kupitz, C., Barty, A., Fromme, P., Koralek, J. D., Tanaka, T., Spence, J., Liang, M., Hunter, M. S., Boutet, S., Nango, E., Moffat, K., Groenhof, G., Ihalainen, J., Stojkovic, E. A., Schmidt, M. and Westenhoff, S.
    The room temperature crystal structure of a bacterial phytochrome determined by serial femtosecond crystallography. Sci. Rep. 6, 35279 (2016)
  49. Colletier, J. P., Sliwa, M., Gallat, F. X., Sugahara, M., Guillon, V., Schiro, G., Coquelle, N., Woodhouse, J., Roux, L., Gotthard, G., Royant, A., Uriarte, L. M., Ruckebusch, C., Joti, Y., Byrdin, M., Mizohata, E., Nango, E., Tanaka, T., Tono, K., Yabashi, M., Adam, V., Cammarata, M., Schlichting, I., Bourgeois, D. and Weik, M.
    Serial Femtosecond Crystallography and Ultrafast Absorption Spectroscopy of the Photoswitchable Fluorescent Protein IrisFP. J. Phys. Chem. Lett. 7, 882-887 (2016)
  50. Yamashita, K., Pan, D., Okuda, T., Sugahara, M., Kodan, A., Yamaguchi, T., Murai, T., Gomi, K., Kajiyama, N., Mizohata, E., Suzuki, M., Nango, E., Tono, K., Joti, Y., Kameshima, T., Park, J., Song, C., Hatsui, T., Yabashi, M., Iwata, S., Kato, H., Ago, H., Yamamoto, M. and Nakatsu, T.
    An isomorphous replacement method for efficient de novo phasing for serial femtosecond crystallography. Sci. Rep. 5, 14017 (2015)
  51. Tono, K., Nango, E., Sugahara, M., Song, C., Park, J., Tanaka, T., Tanaka, R., Joti, Y., Kameshima, T., Ono, S., Hatsui, T., Mizohata, E., Suzuki, M., Shimamura, T., Tanaka, Y., Iwata, S. and Yabashi, M.
    Diverse application platform for hard X-ray diffraction in SACLA (DAPHNIS): application to serial protein crystallography using an X-ray free-electron laser. J. Synchrotron Radiat. 22, 532-537 (2015)
  52. Sugahara, M., Mizohata, E., Nango, E., Suzuki, M., Tanaka, T., Masuda, T., Tanaka, R., Shimamura, T., Tanaka, Y., Suno, C., Ihara, K., Pan, D., Kakinouchi, K., Sugiyama, S., Murata, M., Inoue, T., Tono, K., Song, C., Park, J., Kameshima, T., Hatsui, T., Joti, Y., Yabashi, M. and Iwata, S.
    Grease matrix as a versatile carrier of proteins for serial crystallography. Nat. Methods 12, 61-63 (2015)
  53. Nakane, T., Song, C., Suzuki, M., Nango, E., Kobayashi, J., Masuda, T., Inoue, S., Mizohata, E., Nakatsu, T., Tanaka, T., Tanaka, R., Shimamura, T., Tono, K., Joti, Y., Kameshima, T., Hatsui, T., Yabashi, M., Nureki, O., Iwata, S. and Sugahara, M.
    Native sulfur/chlorine SAD phasing for serial femtosecond crystallography. Acta Crystallogr. D Biol. Crystallogr. 71, 2519-2525 (2015)
  54. Gallat, F. X., Matsugaki, N., Coussens, N. P., Yagi, K. J., Boudes, M., Higashi, T., Tsuji, D., Tatano, Y., Suzuki, M., Mizohata, E., Tono, K., Joti, Y., Kameshima, T., Park, J., Song, C., Hatsui, T., Yabashi, M., Nango, E., Itoh, K., Coulibaly, F., Tobe, S., Ramaswamy, S., Stay, B., Iwata, S. and Chavas, L. M.
    In vivo crystallography at X-ray free-electron lasers: the next generation of structural biology? Philos. Trans. R. Soc. Lond. B Biol. Sci. 369, 20130497 (2014)
 
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